Overview | 1. A small executable example | 2. Install the Python backend | 3. Run a test | 4. Retrieve a summary | 5. Imputer diagnostics | 6. Sensitivity calibration | 7. Simulated datasets | 8. Stopping the server
Package: citestR 0.1.1
Thomas Robinson
citestR: Conditional Independence of Missingness Test
Tests whether missingness in explanatory variables is conditionally independent of the outcome, given observed data. Uses multiply-imputed datasets and cross-validated classifiers to produce a test statistic and p-value, with a sensitivity parameter (kappa) for calibrating interpretation. Wraps the 'citest' 'Python' engine via a local 'FastAPI' server over 'HTTP', so no 'reticulate' dependency is needed at runtime.
Authors:
citestR_0.1.1.tar.gz
citestR_0.1.1.zip(r-4.7)citestR_0.1.1.zip(r-4.6)citestR_0.1.1.zip(r-4.5)
citestR_0.1.1.tgz(r-4.6-any)citestR_0.1.1.tgz(r-4.5-any)
citestR_0.1.1.tar.gz(r-4.7-any)citestR_0.1.1.tar.gz(r-4.6-any)
citestR_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
citestR/json (API)
| # Install 'citestR' in R: |
| install.packages('citestR', repos = c('https://midasverse.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/midasverse/citest/issues
Last updated from:18055618ea. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 140 | ||
| source / vignettes | OK | 194 | ||
| linux-release-x86_64 | OK | 134 | ||
| macos-release-arm64 | OK | 116 | ||
| macos-oldrel-arm64 | OK | 129 | ||
| windows-devel | OK | 66 | ||
| windows-release | OK | 73 | ||
| windows-oldrel | OK | 70 | ||
| wasm-release | OK | 138 |
Exports:calibration_pivotci_testcompute_kappaensure_serverget_summaryhas_serverimputer_r2install_backendkappa_calibration_tablemake_datasetmake_dataset_parquetsimulate_datastart_serverstop_serveruninstall_backendupdate_backend
Dependencies:askpassclicurlgluehttr2lifecyclemagrittropensslprocessxpsR6rappdirsrlangsysvctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Generate a calibration pivot table | calibration_pivot |
| Run the conditional independence test | ci_test |
| Compute theoretical imputation bias kappa | compute_kappa |
| Ensure the server is running | ensure_server |
| Get a summary of test results | get_summary |
| Check whether the citest server is running | has_server |
| Estimate imputer out-of-sample R-squared | imputer_r2 |
| Install the citest Python backend | install_backend |
| Generate a kappa calibration table | kappa_calibration_table |
| Create a dataset on the server | make_dataset |
| Create a dataset from a Parquet file | make_dataset_parquet |
| Print a citest result | print.citest_result |
| Print a citest summary | print.citest_summary |
| Generate a simulated dataset | simulate_data |
| Start the citest API server | start_server |
| Stop the citest API server | stop_server |
| Uninstall the citest Python backend | uninstall_backend |
| Update the citest Python backend | update_backend |
